A non refundable fee of $30.00 applies and payment must be included with the application. Note that a waiver of the fee may be considered in special circumstances. You can pay online and print the receipt, or come to the ISC and get an official receipt to pay at any bank.
For more details see the CIC website: Application for a Verification of Status (VOS) or Replacement of an Immigration Document
If your passport is lost as well you must arrange to This process varies from country to country. You will have to contact the Embassies, High Commissions or consulate of your nation in order to find out requisites, processing time, costs, etc.
Once you have renewed your passport, you must then renew your study permit, and, if you are planning to travel, your entry visa.